| Das Choudhury S, Guadagno CR, Bashyam S, Mazis A, Ewers BE, Samal A and Awada T (2024) Stress phenotyping analysis leveraging autofluorescence image sequences with machine learning. Front. Plant Sci. 15:1353110. doi: 10.3389/fpls.2024.1353110 | Online |
| Khorchani, M., Awada, T., Schmer, M., Jin, V., Birru, G., Dangal, S. R. S., Suyker, A., & Freidenreich, A. 2024. Long-term croplands water productivity in response to management and climate in the Western US Corn Belt. Agricultural Water Management, 291, 108640. https://doi.org/10.1016/j.agwat.2023.108640. | Online |
| Pan, Y., Sun, J., Yu, H., Bai, G., Ge, Y., Luck, J., and Awada, T. (2024). Transforming Agriculture with Intelligent Data Management and Insights," 2023 IEEE International Conference on Big Data (BigData), Sorrento, Italy, 2023, pp. 3489-3498, doi: 10.1109/BigData59044.2023.10386589 | Online |
| Shiferaw, A., Birru, G., Tadesse, T., Schmer, M. R., Awada, T., Jin, V. L., Wardlow, B., Iqbal, J., Freidenreich, A., Kharel, T., Khorchani, M., Mersha, Z., Begna, S., Sohoulande, C. 2024. Optimizing cover crop management in Eastern Nebraska: Insights from crop simulation modeling. Agronomy, 14(7), 1561. https://doi.org/10.3390/agronomy14071561 | Online |
| Zhao, B., Stephenson, B.M., Awada, T., Volesky, J., Wardlow, B., Zhou, Y., and Shi, Y. (2024). 15-Yr Biomass Production in Semiarid Nebraska Sandhills Grasslands: Part 1—Plant Functional Group Analysis. Rangeland Ecology & Management, 93:49-61. https://doi.org/10.1016/j.rama.2023.12.001 | Online |
| A. Das, S. D. Choudhury, A. K. Das, A. Samal, T. Awada, EmergeNet: A Novel Deep-Learning based Ensemble Segmentation Model for Emergence Timing Detection of Coleoptile, Frontiers in Plant Science, 14(2023), February 2023. | Online |
| Birru, G., Shiferaw, A., Tadesse, T., Schmer, M.R., Jin, V.L., Wardlow, B., Koehler‐Cole, K., Awada, T., Beebout, S., Tsegaye, T. and Kahrel, T., 2023. Simulated impacts of winter rye cover crop on continuous corn yield and soil parameters. Agronomy Journal, 115(3), pp.11141130. | Online |
| Birru, G., Shiferaw, A., Tadesse, T., Wardlow, B., Jin, V.L., Schmer, M., Awada, T., Kharel, T. and Iqbal, J., 2023. Cover crop performance under a changing climate in continuous corn system over nebraska. Journal of Environmental Quality, 53(1):66-77. | Online |
| Chennak, A., Giannakas, K, and Awada, T. (2023). On the Economics of the Transition to a Circular Economy. Circular Economy and Sustainability, 1-17. https://doi.org/10.1007/s43615-023-00297-8. | Online |
| Das Choudhury S, Saha S, Samal A, Mazis A and Awada T (2023) Drought stress prediction and propagation using time series modeling on multimodal plant image sequences. Front. Plant Sci. 14:1003150. doi: 10.3389/fpls.2023.1003150. | Online |
| Li, L., Hosseiniaghdam, E., Drijber, R. Jeske, E., Awada, T., Hiller, J., and Kaiser, M. (2023). Conversion of native grassland to coniferous forests decreased stocks of soil organic carbon and microbial biomass. Plant Soil . https://doi.org/10.1007/s11104-023-06138-9 | Online |
| Mazis, A., Awada, T., Erickson, G. E., Wardlow, B., Wienhold, B. J., Jin, V., Schmer, M., Suyker, A., Zhou, Y., & Hiller, J. 2023. Synergistic use of optical and biophysical traits to assess Bromus inermis pasture performance and quality under different management strategies in Eastern Nebraska, U.S. Agriculture, Ecosystems & Environment, 348, 108400. https://doi.org/10.1016/j.agee.2023.108400. | Online |
| Choudhury, S. D., Guha, S., Das, A., Das, A. K., Samal, A. K., Awada, T. N. (2022). FlowerPhenoNet: Automated Flower Detection from Multi-View Image Sequences Using Deep Neural Networks for Temporal Plant Phenotyping Analysis. REMOTE SENSING, 14(24). | Online |
| Dharni, J. S., Dhatt, B. K., Paul, P., Gao, T., Awada, T. N., Bacher, H., Peleg, Z., Staswick, P., Hupp, J., Yu, H., Walia, H. (2022). A non-destructive approach for measuring rice panicle-level photosynthetic responses using 3D-image reconstruction. PLANT METHODS, 18(1). | Online |
| McPhillips, L. J., Carlson, Z., MacDonald, J. C., Suyker, A., Awada, T. N., Watson, A. K., Okalebo, J., Xiong, Y., Dangal, S., Heil, H. A., Stowell, R., Erickson, G. (2022). Greenhouse Gas Emissions from Two Beef Systems from Birth to Slaughter in Eastern Nebraska (vol. 100, pp. 102-102). | |
| Zhou, X., Gao, T., Zheng, N., Yang, B., Li, Y., Yu, F., Awada, T. N., Zhu, J. (2022). Accuracies of field CO2-H2O data from open-path eddy-covariance flux systems: assessment based on atmospheric physics and biological environment. GEOSCIENTIFIC INSTRUMENTATION METHODS AND DATA SYSTEMS, 11(2), 335-357. | Online |
| Anderson-Teixeira, K. J., Herrmann, V., Rollinson, C. R., Gonzalez, B., Gonzalez-Akre, E. B., Pederson, N., Alexander, M. R., Allen, C., Alfaro-Sanchez, R., Awada, T. N., Baltzer, J. L., Baker, P. J., Birch, J. D., Bunyavejchewin, S., Cherubini, P., Davies, S. J., Dow, C., Helcoski, R., Kaspar, J., Lutz, J. A., Margolis, E. Q., Maxwell, J. T., McMahon, S. M., Piponiot, C., Russo, S. E., Samonil, P., Sniderhan, A. E., Tepley, A. J., Vasickova, I., Vlam, M., Zuidema, P. A. (2021). Joint effects of climate, tree size, and year on annual tree growth derived from tree-ring records of ten globally distributed forests. GLOBAL CHANGE BIOLOGY, 28(1), 245-266.
| Online |
| Bacher, H., Zhu, F., Gao, T., Liu, K., Dhatt, B. K., Awada, T. N., Zhang, C., Distelfeld, A., Yu, H., Peleg, Z., Walia, H. (2021). Wild emmer introgression alters root-to-shoot growth dynamics in durum wheat in response to water stress. PLANT PHYSIOLOGY, 187(3), 1149-1162 | Online |
| Bashyam, S., Choudhury, S. D., Samal, A. K., Awada, T. N. (2021). Visual Growth Tracking for Automated Leaf Stage Monitoring Based on Image Sequence Analysis. REMOTE SENSING, 13(5). | Online |
| Mazis, A., Fowler, J.A., Hiller, J., Zhou, Y., Wardlow, B., Wedin, D.A., Awada, T. 2021. Ecophysio-optical traits of semiarid Nebraska grasslands under different Juniperus virginiana and Pinus ponderosa canopy covers. Ecological Indicators 131 (2021) 108159. doi:10.1016/j.ecolind.2021.108159 | Online |
| Mazis, T., Awada, T. N., Fowler, J., Hiller, J., Zhou, Y., Wardlow, B., Wedin, D. A. (2021). Changes in Ecophysio-Optical Traits of Semiarid Nebraska Grasslands with Juniperus virginiana and Pinus ponderosa Encroachment. Ecological Indicators, 131.
| Online |
| Mills, S. D., Mamo, M., Ruis, S., Blanco-Canqui, H., Schacht, W., Awada, T. N., Li, X., Sutton, P. (2021). Soil properties limiting vegetation establishment along roadsides. JOURNAL OF ENVIRONMENTAL QUALITY, 50(1), 110-121. | Online |
| Wang, L., Zhou, Y., Hu, Q., Tang, Z., Ge, Y., Smith, A., Awada, T. N., Shi, Y. (2021). Early Detection of Encroaching Woody Juniperus virginiana and Its Classification in Multi-Species Forest Using UAS Imagery and Semantic Segmentation Algorithms. REMOTE SENSING, 13(10). | Online |
| Zhou, X., Gao, T., Takle, E.S., Zhen, X., Suyker, A.E., Awada, T., Okalebo, J., Zhu, J. 2021. Air Temperature Equation Derived from Sonic Temperature and Water Vapor Mixing Ratio for Air Flow Sampled Through Closed-Path Eddy-Covariance Flux Systems. Atmospheric Measurement Techniques Discussions. https://doi.org/10.5194/amt-2021-160 :1-31. | Online |
| Battipaglia, G., Awada, T., Aus Der Au, R., Innangi, M., Saurer, M., Cherubini, P. 2020. Increasing Atmospheric CO2 Concentrations Outweighs Effects of Stand Density in Determining Growth and Water Use Efficiency in Pinus Ponderosa of the Semi-Arid Grasslands of Nebraska (U.S.A.) Global Ecology and Conservation 24:1-11. | Online |
| Awada, T., Skolaut, K., Battipaglia, G., Saurer, M., Riveros-Iregui, D., Schapaugh, A., Huddle J., Zhou, X., Martin, D., and Cherubini, P. (2019). Tree-ring stable isotopes show different ecophysiological strategies in native and invasive woody species of | Online |
| Bai, G., Ge, Y., Scoby, D., Leavitt, B., Stoerger, V., Kirchgessner, N., Irmak, S., Graef, G., Schnable, J., Awada, T. (2019). NU-Spidercam: A large-scale, cable-driven, integrated sensing and robotic system for advanced phenotyping, remote sensing, and a | Online |
| Bumann, E., Awada T., Wardlow B., Hayes M., Okalebo J., Helzer C., Mazis A., J. Hiller J., and Cherubini, P. 2019. Assessing Responses of Betula papyrifera to Climate Variability in a Remnant Population along the Niobrara River Valley in Nebraska through | Online |
| Das Choudhury, D., Samal, A., and Awada, T. 2019. Leveraging Image Analysis for High-Throughput Plant Phenotyping. Frontiers in Plant Science. doi: 10.3389/fpls.2019.00508 | Online |
| Fotelli, M.N., Korakaki, E., Paparrizos, S.A., Radoglou, K., Awada, T., Matzarakis, A., 2019. Environmental Controls on the Seasonal Variation in Gas Exchange and Water Balance in a Near-Coastal Mediterranean Pinus halepensis Forest. Forests 2019, 10(4), | Online |
| Aus Der Au R., Awada T., Battipaglia G., Hiller, J., Saurer M., and Cherubini P., 2018. Tree Rings of Pinus ponderosa and Juniperus virginiana Show Different Responses to Stand Density and Water Availability in the Nebraska Grasslands. American Midland N | Online |
| Das Choudhury, S., Bashyam, S., Qui, Y., Samal, A., Awada, T. (2018). Holistic and Component Plant Phenotyping using Temporal Image Sequence. Holistic and Component Plant Phenotyping using Temporal Image Sequence, Plant Methods. 14(35). | |
| Wang, S., Zuo, X., Zhao, X., Awada, T., Luo, Y., Li Y., and Qu. H. (2018). Dominant plant species shape soil bacterial community in semiarid sandy land of northern China. Ecology & Evolution, 8(3):1693-1704. | Online |
| Hay, W., Bihmidine, S., Mutlu, N., Awada, T. N., Weeks, D., Clemente, T. E., Long, S. (2017). Enhancing soybean photosynthetic CO2 assimilation using a cyanobacterial membrane protein, ictB. Journal of Plant Physiology, 212, 58-68. | Online |
| Konstantinos Giannakas, Murray Fulton & Tala Awada. (2017). Hiring leaders: Inference and disagreement about the best person for the job. Palgrave Communications 3, Article number: 17. https://www.nature.com/articles/s41599-017-0019-y
doi:10.1057/s41599 | Online |
| Msanne, J., Awada, T. N., Bryan, N., Schacht, W., Drijber, R., Li, Y., Zhou, X., Okalebo, J., Wedin, D. A., Brandle, J. R., Hiller, J. (2017). Ecophysiological responses of native invasive woody Juniperus virginiana L. to resource availability and stand c | Online |
| Msanne, J., Awada, T., Bryan, N.M., Schacht, W., Drijber, R. Li, Y., Zhou, X., Okalebo, J., Wedin, D., Brandle, J., Hiller, J. 2017. Ecophysiological Responses of Native Invasive Woody Juniperus Virginiana L. to Resource Availability and Stand Characteris | Online |
| Quinn, J., Awada, T. N., Trindade, F., Fulginiti, L., Perrin, R. K. (2017). Combining habitat loss and agricultural intensification improves our understanding of drivers of change in avian abundance in a North American cropland anthrome. Ecology and Evolu | Online |
| S. D. Choudhury, S. Goswami, S. Bashyam, A. Samal, T. Awada. (2017). Automated Stem Angle Determination for Temporal Plant Phenotyping Analysis. ICCV, Computer Vision Challenges in Plant Phenotyping, Venice, Italy. | Online |
| Mykleby, P., Lenters, J., Cutrell, G., Herrman, K., Istanbulluoglu, E., Scott, D., Twine, T., Kucharic, C., Awada, T. N., Soylu, M., Dong, B. 2016. Energy and water response of a vegetated wetland to herbicide treatment of invasive Phragmites australis. J | Online |
| Nguy-Robertson, A., Brinley-Buckley, E., Suyker, A., Awada, T. N. 2016. Determining factors that impact the calibration of consumer-grade digital cameras used for vegetation analysis. International Journal of Remote Sensing, 37(14):3365-3383. | Online |
| Li, Y., Zhao, X., Zhang, F., Awada, T., Wang, S., Zhao, H., Zhang, T., and Li, Y. (2015). Accumulation of soil organic carbon during natural restoration of desertified grassland in China's Horqin Sandy Land. Journal of Arid Land. 7:328-340. | Online |
| Mykleby, P.M., Awada, T., Lenters, J., Bihmidine, S., Yarina, A. and Young, S. (2015). Ecophysiological responses of invasive and native phragmites australis to temperature and nitrogen fertilization. Great Plains Research. 25:63-74. | |
| Zhou, X., Schoeneberger, M.M., Brandle, J., Awada, T., Chu, J., Martin, D.L., Li, J., Li, Y., and Mize, C.W. (2015). Analyzing the uncertainties in use of forest-derived biomass equations for open-grown trees in agricultural land. Forest Science. 61:14 | Online |
| Bihmidine, S., Cao, M., Kang, M., Awada, T., Van Etten, J.L., Dunigan, D.D., and Clemente, T.E. (2014). Expression of Chlorovirus MT325 aquaglyceroporin (aqpv1) in tobacco and its role in mitigating drought stress. Planta. 240:209-221. | |
| Guangyong Li, John E. Froehlich, Christian Elowsky, Joseph Msanne, Andrew C. Ostosh, Chi Zhang, Tala Awada and James R. Alfano. (2014) Distinct Pseudomonas type III effectors utilize a cleavable transit peptide to target chloroplasts. The Plant Journal, 7 | Online |
| Zhou, X., Schoenberger, M.M., Brandle, J.R., Awada, T.N., Chu, J., Martin, D.L., Li, J., Li, Y., Mize, C.W. 2014. Analyzing the Uncertainties in Use of Forest-Derived Biomass Equations for Open-Grown Trees in Agricultural Land. Forest Science. 60:1-18. | Online |
| Awada, T., El-Hage, R., Geha, M., Wedin, D.A., Huddle, J.A., Zhou, X., Msanne, J., Sudmeyer, R.A., Martin, D.L., and Brandle, J.R. (2013). Intra-annual variability and environmental controls over transpiration in a 58-year-old even-aged stand of invasive | Online |
| Bihmidine, S., Lin, J., Stone, J.M., Awada, T., Specht, J.E., Clemente, T.E. (2013). Activity of the Arabidopsis RD29A and RD29B promoter elements in soybean. Planta. 237(1):55-64. | |
| Li, Y., Brandle, J., Awada, T., Chen, Y., Hana, J., Zhang, F., Luo. Y. (2013). Accumulation of carbon and nitrogen in the plant-soil system after afforestation of active sand dunes in China's Horqin Sandy Land. Agriculture, Ecosystems & Environment. 177: | Online |
| Chen Y., Li, Y., Awada, T., Han J., and Luo Y. (2012). Carbon sequestration in the total and light fraction soil organic matter along chronosequence in grazing exclosures in a semiarid degraded sandy site in China. Journal of Arid Land, 4:411-419 | Online |
| Chen, Y., Li, Y., Zhao, X., Awada, T., Shang, W., and Han, J. (2012) Effects of Grazing Exclusion on Soil Properties and on Ecosystem Carbon and Nitrogen Storage in a Sandy Rangeland of Inner Mongolia, Northern China. Environmental Management. 50(4):622- | |
| Christos Bazakos, Maria E. Manioudaki, Ioannis Therios, Demetrios Voyiatzis,Dimitris Kafetzopoulos, Tala Awada, Panagiotis Kalaitzis. (2012). Comparative Transcriptome Analysis of Two Olive Cultivars in Response to NaCl-Stress. PLoS ONE. 7(8): e42931. | Online |
| Li, Y.Q., Awada, T., Shang, W., Chen, Y.P., Zhou, X.H., Zuo, X.A., Wang ,S.K., Liu, X.P., and Feng, J. (2012). Mongolian pine plantations enhance soil physico-chemical properties and carbon and nitrogen capacities in semi-arid degraded sandy land in China | Online |
| Msanne, J., Xu, D., Konda, A.R., Casas-Mollano, J.A., Awada, T., Cahoon, E.B., and Cerutti, H. (2012). Metabolic and gene expression changes triggered by nitrogen deprivation in photoautotrophically grown microalgae Chlamydomonas reinhardtii and Coccomyxa | Online |
| Bazakos, C., Manioudaki, M., Therios, I., Voyiatzis, D., Kafetzopoulos, D., Sarropoulou, E., Awada, T., and Kalaitzis, P. (2011). Gene expression analysis of olive tree (Olea europaea L.) in response to salt stress. Acta Horticulturae, 924:47-54. | |
| Msanne, J., Jiusheng, L., Stone, J., and Awada, T. (2011). Characterization of abiotic stress-responsive Arabidopsis thaliana RD29A and RD29B genes and evaluation of transgenes. Planta. 234:97-107. | |
| Zhou, X.H., Brandle, J.R., Awada, T., Schoeneberger, M.M., Martin, D.L., and Tang, Z.H. (2011). The use of forest-derived specific gravity for the conversion of volume to biomass for open-grown trees on agricultural land. Biomass and Bioenergy. 35: 172 | Online |
| Bihmidine, S., Bryan, N.M., Payne, K.R., Parde, M.R., Okalebo, J.A., Cooperstein, S.E., and Awada, T. 2010. Photosynthetic performance of invasive Pinus ponderosa and Juniperus virginiana seedlings under gradual soil water depletion. Plant Biology. 12: 66 | Online |
| Eggemeyer, K.D., Awada, T., Harvey, F.E., Wedin, D., Zanner, R. and Zhou, X. 2009. Seasonal Changes in depth of water uptake for encroaching trees Juniperus virginiana and Pinus ponderosa and two dominant C4 grasses in a semi-arid grassland. Tree Physiolo | Online |
| Allen, R., Mazis, A., Wardlow, B., Cherubini, P., Hiller, J., Wedin, D.A., Awada, T. 2023. Coupling dendroecological and remote sensing techniques to assess the biophysical traits of Juniperus virginiana and Pinus ponderosa within the Semi-Arid grasslands of the Nebraska Sandhills. Forest Ecology and Management 544 (2023) 121184. https://doi.org/10.1016/j.foreco.2023.121184 | Online |